Hi,
The goal of using the canonical URL on the listings is that you'll get always the same menu item used when you click on the product page link regardless from which menu item you're coming from.
So you're saying that you want to use a feature, which does something you don't want.
So no, you don't want to use that feature.
If you want to avoid SEO duplicate content errors, you don't need to activate that option. All you need is to have a canonical URL in your products, and that's already the case as far as I can see.