Hi,
HikaShop doesn't have any hidden variable for products that gets set when you copy it and you can't change. So I don't see how it could be a bug.
Then, you're not looking at the same product, or you're not looking at the correct field of the product.
For example, if your product has variants, then you might be looking at the product code of the variants on the frontend and you might not have changed that in the backend.
Please understand that without screenshots of the settings of your product and a link to the product page, we can't say much more.